Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rp1l1Q8CGM2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rp1l1Q8CGM2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rp1l1Q8CGM2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Gm27300-201ENSMUST00000184085 97 ntBASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Gm27335-201ENSMUST00000184758 97 ntBASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Gm17968-201ENSMUST00000194902 784 ntBASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rp1l1Q8CGM2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.15■□□□□ 0.34
Rp1l1Q8CGM2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Rp1l1Q8CGM2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rp1l1Q8CGM2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rp1l1Q8CGM2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rp1l1Q8CGM2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rp1l1Q8CGM2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Rp1l1Q8CGM2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rp1l1Q8CGM2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rp1l1Q8CGM2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rp1l1Q8CGM2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rp1l1Q8CGM2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rp1l1Q8CGM2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rp1l1Q8CGM2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.34
Rp1l1Q8CGM2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Gm36967-201ENSMUST00000193814 266 ntBASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Gm44872-201ENSMUST00000207864 420 ntBASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rp1l1Q8CGM2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 Gm13616-201ENSMUST00000120600 222 ntBASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.13■□□□□ 0.33
Rp1l1Q8CGM2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms