Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Smc4Q8CG47 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc4Q8CG47 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smc4Q8CG47 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.43■□□□□ 0.86
Smc4Q8CG47 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Smc4Q8CG47 Gm44430-201ENSMUST00000203376 995 ntBASIC20.43■□□□□ 0.86
Smc4Q8CG47 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc4Q8CG47 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc4Q8CG47 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Smc4Q8CG47 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.43■□□□□ 0.86
Smc4Q8CG47 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc4Q8CG47 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc4Q8CG47 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Smc4Q8CG47 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smc4Q8CG47 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc4Q8CG47 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Smc4Q8CG47 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc4Q8CG47 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc4Q8CG47 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smc4Q8CG47 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.42■□□□□ 0.86
Smc4Q8CG47 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc4Q8CG47 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Smc4Q8CG47 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc4Q8CG47 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Smc4Q8CG47 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Smc4Q8CG47 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc4Q8CG47 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc4Q8CG47 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc4Q8CG47 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Smc4Q8CG47 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc4Q8CG47 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc4Q8CG47 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smc4Q8CG47 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc4Q8CG47 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc4Q8CG47 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc4Q8CG47 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc4Q8CG47 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc4Q8CG47 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc4Q8CG47 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc4Q8CG47 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc4Q8CG47 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Smc4Q8CG47 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc4Q8CG47 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc4Q8CG47 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc4Q8CG47 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc4Q8CG47 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc4Q8CG47 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc4Q8CG47 Gm7153-201ENSMUST00000117092 455 ntBASIC20.4■□□□□ 0.86
Smc4Q8CG47 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.4■□□□□ 0.86
Smc4Q8CG47 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.4■□□□□ 0.86
Smc4Q8CG47 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Smc4Q8CG47 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc4Q8CG47 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc4Q8CG47 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc4Q8CG47 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc4Q8CG47 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc4Q8CG47 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Smc4Q8CG47 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
Smc4Q8CG47 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.39■□□□□ 0.86
Smc4Q8CG47 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smc4Q8CG47 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Smc4Q8CG47 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc4Q8CG47 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc4Q8CG47 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Smc4Q8CG47 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Smc4Q8CG47 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Smc4Q8CG47 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.39■□□□□ 0.85
Smc4Q8CG47 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc4Q8CG47 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc4Q8CG47 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Smc4Q8CG47 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc4Q8CG47 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc4Q8CG47 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Smc4Q8CG47 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Smc4Q8CG47 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Smc4Q8CG47 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smc4Q8CG47 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Smc4Q8CG47 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Smc4Q8CG47 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Smc4Q8CG47 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.38■□□□□ 0.85
Smc4Q8CG47 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smc4Q8CG47 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Smc4Q8CG47 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.38■□□□□ 0.85
Smc4Q8CG47 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc4Q8CG47 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smc4Q8CG47 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smc4Q8CG47 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.38■□□□□ 0.85
Smc4Q8CG47 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc4Q8CG47 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc4Q8CG47 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Smc4Q8CG47 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc4Q8CG47 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc4Q8CG47 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc4Q8CG47 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc4Q8CG47 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc4Q8CG47 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Smc4Q8CG47 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc4Q8CG47 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc4Q8CG47 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smc4Q8CG47 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms