Protein–RNA interactions for Protein: Q8CFC7

Clasrp, CLK4-associating serine/arginine rich protein, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClasrpQ8CFC7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClasrpQ8CFC7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClasrpQ8CFC7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClasrpQ8CFC7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.82■□□□□ 0.44
ClasrpQ8CFC7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
ClasrpQ8CFC7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClasrpQ8CFC7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClasrpQ8CFC7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ClasrpQ8CFC7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClasrpQ8CFC7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ClasrpQ8CFC7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ClasrpQ8CFC7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ClasrpQ8CFC7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClasrpQ8CFC7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.81■□□□□ 0.44
ClasrpQ8CFC7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ClasrpQ8CFC7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ClasrpQ8CFC7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ClasrpQ8CFC7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ClasrpQ8CFC7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ClasrpQ8CFC7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ClasrpQ8CFC7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClasrpQ8CFC7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClasrpQ8CFC7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClasrpQ8CFC7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ClasrpQ8CFC7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.81■□□□□ 0.44
ClasrpQ8CFC7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClasrpQ8CFC7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ClasrpQ8CFC7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ClasrpQ8CFC7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ClasrpQ8CFC7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClasrpQ8CFC7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ClasrpQ8CFC7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClasrpQ8CFC7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Gm2274-201ENSMUST00000184539 609 ntBASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClasrpQ8CFC7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
ClasrpQ8CFC7 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.77■□□□□ 0.44
ClasrpQ8CFC7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClasrpQ8CFC7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClasrpQ8CFC7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClasrpQ8CFC7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms