Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lrif1Q8CDD9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Lrif1Q8CDD9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrif1Q8CDD9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Lrif1Q8CDD9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrif1Q8CDD9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrif1Q8CDD9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrif1Q8CDD9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Mir1199-201ENSMUST00000117015 119 ntBASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrif1Q8CDD9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrif1Q8CDD9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Lrif1Q8CDD9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Lrif1Q8CDD9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Gm15375-201ENSMUST00000119510 849 ntBASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Mir6349-201ENSMUST00000184059 97 ntBASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.39■□□□□ 0.21
Lrif1Q8CDD9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrif1Q8CDD9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrif1Q8CDD9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Lrif1Q8CDD9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrif1Q8CDD9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrif1Q8CDD9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrif1Q8CDD9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrif1Q8CDD9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Lrif1Q8CDD9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lrif1Q8CDD9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrif1Q8CDD9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms