Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa4Q8CA71 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.24■□□□□ 0.67
Shisa4Q8CA71 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa4Q8CA71 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.23■□□□□ 0.67
Shisa4Q8CA71 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Gm18669-201ENSMUST00000216049 778 ntBASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Shisa4Q8CA71 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa4Q8CA71 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa4Q8CA71 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.21■□□□□ 0.67
Shisa4Q8CA71 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa4Q8CA71 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa4Q8CA71 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa4Q8CA71 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Shisa4Q8CA71 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Shisa4Q8CA71 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.21■□□□□ 0.67
Shisa4Q8CA71 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa4Q8CA71 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa4Q8CA71 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa4Q8CA71 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa4Q8CA71 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa4Q8CA71 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms