Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Uba3Q8C878 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Uba3Q8C878 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Uba3Q8C878 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Uba3Q8C878 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Uba3Q8C878 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Uba3Q8C878 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.48■□□□□ 0.39
Uba3Q8C878 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Uba3Q8C878 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Uba3Q8C878 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.48■□□□□ 0.39
Uba3Q8C878 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Uba3Q8C878 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Uba3Q8C878 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Uba3Q8C878 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.47■□□□□ 0.39
Uba3Q8C878 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Uba3Q8C878 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.47■□□□□ 0.39
Uba3Q8C878 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Uba3Q8C878 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Uba3Q8C878 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.47■□□□□ 0.39
Uba3Q8C878 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Uba3Q8C878 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Uba3Q8C878 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Uba3Q8C878 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.47■□□□□ 0.39
Uba3Q8C878 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Uba3Q8C878 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Uba3Q8C878 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Uba3Q8C878 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Uba3Q8C878 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Uba3Q8C878 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Uba3Q8C878 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Uba3Q8C878 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Uba3Q8C878 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Uba3Q8C878 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Uba3Q8C878 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.47■□□□□ 0.39
Uba3Q8C878 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Uba3Q8C878 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Uba3Q8C878 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Uba3Q8C878 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Uba3Q8C878 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Uba3Q8C878 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Uba3Q8C878 Gm7977-201ENSMUST00000193787 748 ntBASIC17.46■□□□□ 0.39
Uba3Q8C878 Gm18421-201ENSMUST00000204122 625 ntBASIC17.46■□□□□ 0.39
Uba3Q8C878 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.46■□□□□ 0.39
Uba3Q8C878 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Uba3Q8C878 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Uba3Q8C878 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Uba3Q8C878 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.46■□□□□ 0.39
Uba3Q8C878 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Uba3Q8C878 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Uba3Q8C878 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Uba3Q8C878 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Uba3Q8C878 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Uba3Q8C878 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Uba3Q8C878 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Uba3Q8C878 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.45■□□□□ 0.38
Uba3Q8C878 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Uba3Q8C878 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Uba3Q8C878 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Uba3Q8C878 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Uba3Q8C878 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Uba3Q8C878 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Uba3Q8C878 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Uba3Q8C878 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Uba3Q8C878 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.45■□□□□ 0.38
Uba3Q8C878 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Uba3Q8C878 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Uba3Q8C878 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.45■□□□□ 0.38
Uba3Q8C878 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Uba3Q8C878 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Uba3Q8C878 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Uba3Q8C878 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Uba3Q8C878 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Uba3Q8C878 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Uba3Q8C878 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Uba3Q8C878 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Uba3Q8C878 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.44■□□□□ 0.38
Uba3Q8C878 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Uba3Q8C878 AA414768-201ENSMUST00000121924 1257 ntBASIC17.44■□□□□ 0.38
Uba3Q8C878 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Uba3Q8C878 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.44■□□□□ 0.38
Uba3Q8C878 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms