Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Gm7213-201ENSMUST00000215977 950 ntBASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Sh3rf3Q8C120 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Sh3rf3Q8C120 Actl10-202ENSMUST00000226583 1501 ntBASIC17.27■□□□□ 0.36
Sh3rf3Q8C120 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3rf3Q8C120 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Sh3rf3Q8C120 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Sh3rf3Q8C120 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Sh3rf3Q8C120 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3rf3Q8C120 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3rf3Q8C120 Gm13186-201ENSMUST00000118031 316 ntBASIC17.27■□□□□ 0.36
Sh3rf3Q8C120 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Sh3rf3Q8C120 Mir5130-201ENSMUST00000175160 84 ntBASIC17.27■□□□□ 0.36
Sh3rf3Q8C120 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3rf3Q8C120 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Sh3rf3Q8C120 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3rf3Q8C120 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3rf3Q8C120 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3rf3Q8C120 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Sh3rf3Q8C120 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Sh3rf3Q8C120 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3rf3Q8C120 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3rf3Q8C120 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3rf3Q8C120 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3rf3Q8C120 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3rf3Q8C120 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Gm6433-201ENSMUST00000118634 875 ntBASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Gm18959-201ENSMUST00000208954 655 ntBASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf3Q8C120 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Gm45058-201ENSMUST00000205810 766 ntBASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf3Q8C120 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms