Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.26■□□□□ 0.35
Trim35Q8C006 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim35Q8C006 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.25■□□□□ 0.35
Trim35Q8C006 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim35Q8C006 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 Gm26609-201ENSMUST00000181302 852 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim35Q8C006 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 Gm43489-201ENSMUST00000196810 993 ntBASIC17.25■□□□□ 0.35
Trim35Q8C006 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.25■□□□□ 0.35
Trim35Q8C006 Gm10297-201ENSMUST00000207136 651 ntBASIC17.25■□□□□ 0.35
Trim35Q8C006 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Trim35Q8C006 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim35Q8C006 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trim35Q8C006 AC121986.1-201ENSMUST00000218588 781 ntBASIC17.25■□□□□ 0.35
Trim35Q8C006 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.25■□□□□ 0.35
Trim35Q8C006 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim35Q8C006 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Trim35Q8C006 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim35Q8C006 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim35Q8C006 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim35Q8C006 Gm37891-201ENSMUST00000195585 1326 ntBASIC17.24■□□□□ 0.35
Trim35Q8C006 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim35Q8C006 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim35Q8C006 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trim35Q8C006 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim35Q8C006 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim35Q8C006 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim35Q8C006 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim35Q8C006 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim35Q8C006 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim35Q8C006 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim35Q8C006 Gm14005-208ENSMUST00000223654 681 ntBASIC17.24■□□□□ 0.35
Trim35Q8C006 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim35Q8C006 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim35Q8C006 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim35Q8C006 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.24■□□□□ 0.35
Trim35Q8C006 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim35Q8C006 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Trim35Q8C006 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.24■□□□□ 0.35
Trim35Q8C006 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim35Q8C006 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim35Q8C006 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.24■□□□□ 0.35
Trim35Q8C006 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim35Q8C006 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim35Q8C006 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim35Q8C006 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim35Q8C006 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim35Q8C006 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim35Q8C006 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim35Q8C006 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim35Q8C006 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim35Q8C006 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim35Q8C006 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim35Q8C006 Mir6982-201ENSMUST00000184354 68 ntBASIC17.23■□□□□ 0.35
Trim35Q8C006 Gm43084-201ENSMUST00000200696 947 ntBASIC17.23■□□□□ 0.35
Trim35Q8C006 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC17.23■□□□□ 0.35
Trim35Q8C006 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim35Q8C006 CT009754.4-201ENSMUST00000221430 565 ntBASIC17.23■□□□□ 0.35
Trim35Q8C006 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.23■□□□□ 0.35
Trim35Q8C006 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim35Q8C006 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim35Q8C006 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim35Q8C006 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim35Q8C006 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim35Q8C006 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim35Q8C006 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim35Q8C006 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim35Q8C006 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim35Q8C006 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim35Q8C006 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim35Q8C006 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim35Q8C006 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim35Q8C006 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim35Q8C006 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
Trim35Q8C006 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC17.22■□□□□ 0.35
Trim35Q8C006 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC17.22■□□□□ 0.35
Trim35Q8C006 Gm44554-201ENSMUST00000208738 147 ntBASIC17.22■□□□□ 0.35
Trim35Q8C006 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim35Q8C006 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim35Q8C006 Tgds-204ENSMUST00000228543 1594 ntBASIC17.22■□□□□ 0.35
Trim35Q8C006 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms