Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trerf1Q8BXJ2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Trerf1Q8BXJ2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Trerf1Q8BXJ2 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.48■□□□□ 0.39
Trerf1Q8BXJ2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.48■□□□□ 0.39
Trerf1Q8BXJ2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trerf1Q8BXJ2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trerf1Q8BXJ2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trerf1Q8BXJ2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trerf1Q8BXJ2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trerf1Q8BXJ2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.48■□□□□ 0.39
Trerf1Q8BXJ2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trerf1Q8BXJ2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trerf1Q8BXJ2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trerf1Q8BXJ2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trerf1Q8BXJ2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trerf1Q8BXJ2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Gm27463-201ENSMUST00000183569 57 ntBASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trerf1Q8BXJ2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Gm17661-201ENSMUST00000170317 270 ntBASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Gm9731-201ENSMUST00000209480 747 ntBASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Gm7791-201ENSMUST00000219066 539 ntBASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trerf1Q8BXJ2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trerf1Q8BXJ2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.46■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms