Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SprnQ8BWU1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SprnQ8BWU1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.67□□□□□ -0.06
SprnQ8BWU1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SprnQ8BWU1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.67□□□□□ -0.06
SprnQ8BWU1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.67□□□□□ -0.06
SprnQ8BWU1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
SprnQ8BWU1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Gm10698-201ENSMUST00000182663 604 ntBASIC14.66□□□□□ -0.06
SprnQ8BWU1 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.66□□□□□ -0.06
SprnQ8BWU1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.66□□□□□ -0.06
SprnQ8BWU1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SprnQ8BWU1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SprnQ8BWU1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.65□□□□□ -0.06
SprnQ8BWU1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SprnQ8BWU1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SprnQ8BWU1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SprnQ8BWU1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SprnQ8BWU1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SprnQ8BWU1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SprnQ8BWU1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SprnQ8BWU1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SprnQ8BWU1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SprnQ8BWU1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SprnQ8BWU1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SprnQ8BWU1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SprnQ8BWU1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SprnQ8BWU1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SprnQ8BWU1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SprnQ8BWU1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SprnQ8BWU1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SprnQ8BWU1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SprnQ8BWU1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms