Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk5rap1Q8BTW8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.73■□□□□ 0.11
Cdk5rap1Q8BTW8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk5rap1Q8BTW8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cdk5rap1Q8BTW8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cdk5rap1Q8BTW8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Cdk5rap1Q8BTW8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdk5rap1Q8BTW8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms