Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne3Q8BT60 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne3Q8BT60 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne3Q8BT60 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.03■□□□□ 0.16
Cpne3Q8BT60 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Cpne3Q8BT60 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne3Q8BT60 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne3Q8BT60 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cpne3Q8BT60 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Gm27000-201ENSMUST00000182943 842 ntBASIC16.02■□□□□ 0.16
Cpne3Q8BT60 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.02■□□□□ 0.16
Cpne3Q8BT60 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpne3Q8BT60 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cpne3Q8BT60 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Cpne3Q8BT60 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cpne3Q8BT60 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Cpne3Q8BT60 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Cpne3Q8BT60 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cpne3Q8BT60 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cpne3Q8BT60 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cpne3Q8BT60 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cpne3Q8BT60 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.02■□□□□ 0.15
Cpne3Q8BT60 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cpne3Q8BT60 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cpne3Q8BT60 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cpne3Q8BT60 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.02■□□□□ 0.15
Cpne3Q8BT60 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cpne3Q8BT60 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cpne3Q8BT60 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.01■□□□□ 0.15
Cpne3Q8BT60 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpne3Q8BT60 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne3Q8BT60 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne3Q8BT60 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne3Q8BT60 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne3Q8BT60 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne3Q8BT60 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cpne3Q8BT60 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne3Q8BT60 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Cpne3Q8BT60 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cpne3Q8BT60 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16■□□□□ 0.15
Cpne3Q8BT60 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne3Q8BT60 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cpne3Q8BT60 Otx2os1-204ENSMUST00000227221 751 ntBASIC16■□□□□ 0.15
Cpne3Q8BT60 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cpne3Q8BT60 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne3Q8BT60 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne3Q8BT60 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne3Q8BT60 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne3Q8BT60 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cpne3Q8BT60 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne3Q8BT60 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne3Q8BT60 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpne3Q8BT60 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Cpne3Q8BT60 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms