Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.58■□□□□ 0.4
Rd3Q8BRE0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rd3Q8BRE0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rd3Q8BRE0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Rd3Q8BRE0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rd3Q8BRE0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rd3Q8BRE0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rd3Q8BRE0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rd3Q8BRE0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Gm15372-201ENSMUST00000120729 834 ntBASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rd3Q8BRE0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rd3Q8BRE0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rd3Q8BRE0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.55■□□□□ 0.4
Rd3Q8BRE0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rd3Q8BRE0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rd3Q8BRE0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.55■□□□□ 0.4
Rd3Q8BRE0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rd3Q8BRE0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rd3Q8BRE0 Rprl3-201ENSMUST00000157400 290 ntBASIC17.55■□□□□ 0.4
Rd3Q8BRE0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rd3Q8BRE0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rd3Q8BRE0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rd3Q8BRE0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rd3Q8BRE0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rd3Q8BRE0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rd3Q8BRE0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.55■□□□□ 0.4
Rd3Q8BRE0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Gm27867-201ENSMUST00000184778 125 ntBASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rd3Q8BRE0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rd3Q8BRE0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rd3Q8BRE0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rd3Q8BRE0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.53■□□□□ 0.4
Rd3Q8BRE0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rd3Q8BRE0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rd3Q8BRE0 Gm18733-201ENSMUST00000173950 856 ntBASIC17.53■□□□□ 0.4
Rd3Q8BRE0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms