Protein–RNA interactions for Protein: Q8BP99

UPF0500 protein C1orf216 homolog, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8BP99 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8BP99 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8BP99 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8BP99 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q8BP99 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q8BP99 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8BP99 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8BP99 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8BP99 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8BP99 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
Q8BP99 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8BP99 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.34■□□□□ 0.21
Q8BP99 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Q8BP99 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Q8BP99 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q8BP99 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Q8BP99 Gm43799-201ENSMUST00000201845 579 ntBASIC16.34■□□□□ 0.21
Q8BP99 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.34■□□□□ 0.21
Q8BP99 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q8BP99 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.34■□□□□ 0.21
Q8BP99 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8BP99 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q8BP99 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Q8BP99 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8BP99 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q8BP99 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q8BP99 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.34■□□□□ 0.21
Q8BP99 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Q8BP99 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Q8BP99 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Q8BP99 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8BP99 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Q8BP99 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Q8BP99 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
Q8BP99 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.33■□□□□ 0.2
Q8BP99 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8BP99 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.33■□□□□ 0.2
Q8BP99 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.33■□□□□ 0.2
Q8BP99 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8BP99 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8BP99 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Q8BP99 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Q8BP99 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8BP99 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8BP99 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8BP99 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Q8BP99 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Q8BP99 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Q8BP99 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8BP99 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Q8BP99 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Q8BP99 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Q8BP99 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q8BP99 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q8BP99 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Q8BP99 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8BP99 Gm6433-201ENSMUST00000118634 875 ntBASIC16.32■□□□□ 0.2
Q8BP99 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Q8BP99 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.32■□□□□ 0.2
Q8BP99 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Q8BP99 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8BP99 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q8BP99 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8BP99 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q8BP99 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8BP99 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8BP99 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Q8BP99 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8BP99 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Q8BP99 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8BP99 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8BP99 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q8BP99 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8BP99 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8BP99 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q8BP99 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8BP99 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8BP99 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.31■□□□□ 0.2
Q8BP99 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Q8BP99 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.31■□□□□ 0.2
Q8BP99 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8BP99 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q8BP99 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Q8BP99 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8BP99 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Q8BP99 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Q8BP99 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Q8BP99 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Q8BP99 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q8BP99 Gm13836-201ENSMUST00000121159 501 ntBASIC16.31■□□□□ 0.2
Q8BP99 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.31■□□□□ 0.2
Q8BP99 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Q8BP99 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Q8BP99 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Q8BP99 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.31■□□□□ 0.2
Q8BP99 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.31■□□□□ 0.2
Q8BP99 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q8BP99 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8BP99 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8BP99 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms