Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap4Q8BMK4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ckap4Q8BMK4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap4Q8BMK4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap4Q8BMK4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap4Q8BMK4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Ckap4Q8BMK4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ckap4Q8BMK4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ckap4Q8BMK4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ckap4Q8BMK4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ckap4Q8BMK4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Ckap4Q8BMK4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Mir1199-201ENSMUST00000117015 119 ntBASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap4Q8BMK4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap4Q8BMK4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms