Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf18Q8BM39 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf18Q8BM39 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.82■□□□□ 0.12
Prpf18Q8BM39 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.82■□□□□ 0.12
Prpf18Q8BM39 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf18Q8BM39 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Prpf18Q8BM39 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf18Q8BM39 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf18Q8BM39 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf18Q8BM39 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf18Q8BM39 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf18Q8BM39 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf18Q8BM39 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.82■□□□□ 0.12
Prpf18Q8BM39 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf18Q8BM39 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf18Q8BM39 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf18Q8BM39 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 Gm15375-201ENSMUST00000119510 849 ntBASIC15.81■□□□□ 0.12
Prpf18Q8BM39 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.81■□□□□ 0.12
Prpf18Q8BM39 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.81■□□□□ 0.12
Prpf18Q8BM39 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf18Q8BM39 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Gm13401-201ENSMUST00000117074 291 ntBASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Gm13158-201ENSMUST00000122007 736 ntBASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.8■□□□□ 0.12
Prpf18Q8BM39 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.8■□□□□ 0.12
Prpf18Q8BM39 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Gm20049-201ENSMUST00000219950 730 ntBASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.79■□□□□ 0.12
Prpf18Q8BM39 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf18Q8BM39 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf18Q8BM39 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Prpf18Q8BM39 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Prpf18Q8BM39 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf18Q8BM39 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf18Q8BM39 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Prpf18Q8BM39 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf18Q8BM39 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf18Q8BM39 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.78■□□□□ 0.12
Prpf18Q8BM39 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms