Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Mtag2-201ENSMUST00000058665 714 ntBASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scn3bQ8BHK2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Gm10138-203ENSMUST00000206952 366 ntBASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Scn3bQ8BHK2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Gm5408-201ENSMUST00000197998 747 ntBASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scn3bQ8BHK2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.46■□□□□ 0.06
Scn3bQ8BHK2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Scn3bQ8BHK2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.46■□□□□ 0.06
Scn3bQ8BHK2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Scn3bQ8BHK2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Scn3bQ8BHK2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Scn3bQ8BHK2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Scn3bQ8BHK2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scn3bQ8BHK2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn3bQ8BHK2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scn3bQ8BHK2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.45■□□□□ 0.06
Scn3bQ8BHK2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn3bQ8BHK2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn3bQ8BHK2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn3bQ8BHK2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn3bQ8BHK2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn3bQ8BHK2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.45■□□□□ 0.06
Scn3bQ8BHK2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scn3bQ8BHK2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
Scn3bQ8BHK2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms