Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim50Q810I2 Gm9987-201ENSMUST00000069768 567 ntBASIC16.17■□□□□ 0.18
Trim50Q810I2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trim50Q810I2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim50Q810I2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim50Q810I2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim50Q810I2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim50Q810I2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim50Q810I2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim50Q810I2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim50Q810I2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.17■□□□□ 0.18
Trim50Q810I2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trim50Q810I2 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.16■□□□□ 0.18
Trim50Q810I2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim50Q810I2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim50Q810I2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim50Q810I2 Gm13216-201ENSMUST00000117145 591 ntBASIC16.16■□□□□ 0.18
Trim50Q810I2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trim50Q810I2 Mir1668-201ENSMUST00000184114 107 ntBASIC16.16■□□□□ 0.18
Trim50Q810I2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim50Q810I2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim50Q810I2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim50Q810I2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim50Q810I2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim50Q810I2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim50Q810I2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim50Q810I2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim50Q810I2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim50Q810I2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim50Q810I2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim50Q810I2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim50Q810I2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim50Q810I2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Trim50Q810I2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim50Q810I2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim50Q810I2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim50Q810I2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trim50Q810I2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim50Q810I2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim50Q810I2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim50Q810I2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim50Q810I2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim50Q810I2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim50Q810I2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim50Q810I2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Trim50Q810I2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim50Q810I2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim50Q810I2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim50Q810I2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim50Q810I2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim50Q810I2 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.15■□□□□ 0.18
Trim50Q810I2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim50Q810I2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim50Q810I2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim50Q810I2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim50Q810I2 Phf7-203ENSMUST00000226565 1971 ntBASIC16.15■□□□□ 0.18
Trim50Q810I2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim50Q810I2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim50Q810I2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trim50Q810I2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim50Q810I2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.14■□□□□ 0.17
Trim50Q810I2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim50Q810I2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trim50Q810I2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim50Q810I2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim50Q810I2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.14■□□□□ 0.17
Trim50Q810I2 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.14■□□□□ 0.17
Trim50Q810I2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trim50Q810I2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.14■□□□□ 0.17
Trim50Q810I2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim50Q810I2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim50Q810I2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim50Q810I2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim50Q810I2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms