Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trnp1Q80ZI1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.67■□□□□ 0.58
Trnp1Q80ZI1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trnp1Q80ZI1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Trnp1Q80ZI1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trnp1Q80ZI1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trnp1Q80ZI1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Trnp1Q80ZI1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trnp1Q80ZI1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.67■□□□□ 0.58
Trnp1Q80ZI1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trnp1Q80ZI1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.66■□□□□ 0.58
Trnp1Q80ZI1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trnp1Q80ZI1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.66■□□□□ 0.58
Trnp1Q80ZI1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trnp1Q80ZI1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trnp1Q80ZI1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trnp1Q80ZI1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trnp1Q80ZI1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trnp1Q80ZI1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trnp1Q80ZI1 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.66■□□□□ 0.58
Trnp1Q80ZI1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trnp1Q80ZI1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trnp1Q80ZI1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trnp1Q80ZI1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trnp1Q80ZI1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Gm25406-201ENSMUST00000157599 105 ntBASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trnp1Q80ZI1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.64■□□□□ 0.58
Trnp1Q80ZI1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trnp1Q80ZI1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.64■□□□□ 0.58
Trnp1Q80ZI1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trnp1Q80ZI1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.64■□□□□ 0.57
Trnp1Q80ZI1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.64■□□□□ 0.57
Trnp1Q80ZI1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trnp1Q80ZI1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trnp1Q80ZI1 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.64■□□□□ 0.57
Trnp1Q80ZI1 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.64■□□□□ 0.57
Trnp1Q80ZI1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.64■□□□□ 0.57
Trnp1Q80ZI1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trnp1Q80ZI1 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.64■□□□□ 0.57
Trnp1Q80ZI1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trnp1Q80ZI1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trnp1Q80ZI1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trnp1Q80ZI1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trnp1Q80ZI1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trnp1Q80ZI1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trnp1Q80ZI1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Chchd1-203ENSMUST00000224633 557 ntBASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trnp1Q80ZI1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trnp1Q80ZI1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trnp1Q80ZI1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trnp1Q80ZI1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trnp1Q80ZI1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.62■□□□□ 0.57
Trnp1Q80ZI1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.62■□□□□ 0.57
Trnp1Q80ZI1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Trnp1Q80ZI1 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.62■□□□□ 0.57
Trnp1Q80ZI1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.62■□□□□ 0.57
Trnp1Q80ZI1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trnp1Q80ZI1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trnp1Q80ZI1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Trnp1Q80ZI1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms