Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC21.32■■□□□ 1
Shank2Q80Z38 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC21.32■■□□□ 1
Shank2Q80Z38 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shank2Q80Z38 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shank2Q80Z38 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.32■■□□□ 1
Shank2Q80Z38 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Shank2Q80Z38 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shank2Q80Z38 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC21.32■■□□□ 1
Shank2Q80Z38 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC21.32■■□□□ 1
Shank2Q80Z38 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC21.32■■□□□ 1
Shank2Q80Z38 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.32■■□□□ 1
Shank2Q80Z38 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Shank2Q80Z38 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC21.31■■□□□ 1
Shank2Q80Z38 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Shank2Q80Z38 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shank2Q80Z38 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shank2Q80Z38 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shank2Q80Z38 Ddx41-204ENSMUST00000224765 2199 ntBASIC21.31■■□□□ 1
Shank2Q80Z38 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC21.31■■□□□ 1
Shank2Q80Z38 Gm45203-201ENSMUST00000206384 1831 ntBASIC21.31■■□□□ 1
Shank2Q80Z38 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC21.31■■□□□ 1
Shank2Q80Z38 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.31■■□□□ 1
Shank2Q80Z38 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shank2Q80Z38 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC21.31■■□□□ 1
Shank2Q80Z38 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shank2Q80Z38 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC21.31■■□□□ 1
Shank2Q80Z38 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC21.31■■□□□ 1
Shank2Q80Z38 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC21.31■■□□□ 1
Shank2Q80Z38 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC21.31■■□□□ 1
Shank2Q80Z38 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Shank2Q80Z38 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.31■■□□□ 1
Shank2Q80Z38 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shank2Q80Z38 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC21.31■■□□□ 1
Shank2Q80Z38 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.31■■□□□ 1
Shank2Q80Z38 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC21.31■■□□□ 1
Shank2Q80Z38 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC21.3■■□□□ 1
Shank2Q80Z38 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Shank2Q80Z38 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Shank2Q80Z38 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shank2Q80Z38 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.3■■□□□ 1
Shank2Q80Z38 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shank2Q80Z38 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC21.3■■□□□ 1
Shank2Q80Z38 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC21.3■■□□□ 1
Shank2Q80Z38 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shank2Q80Z38 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.3■■□□□ 1
Shank2Q80Z38 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Shank2Q80Z38 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC21.3■■□□□ 1
Shank2Q80Z38 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC21.3■■□□□ 1
Shank2Q80Z38 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Shank2Q80Z38 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Shank2Q80Z38 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.29■■□□□ 1
Shank2Q80Z38 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shank2Q80Z38 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC21.29■■□□□ 1
Shank2Q80Z38 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shank2Q80Z38 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shank2Q80Z38 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shank2Q80Z38 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Shank2Q80Z38 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Shank2Q80Z38 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC21.29■■□□□ 1
Shank2Q80Z38 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC21.29■■□□□ 1
Shank2Q80Z38 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC21.29■■□□□ 1
Shank2Q80Z38 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC21.29■■□□□ 1
Shank2Q80Z38 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shank2Q80Z38 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Shank2Q80Z38 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC21.29■■□□□ 1
Shank2Q80Z38 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC21.29■■□□□ 1
Shank2Q80Z38 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shank2Q80Z38 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shank2Q80Z38 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Shank2Q80Z38 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shank2Q80Z38 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Shank2Q80Z38 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC21.28■■□□□ 1
Shank2Q80Z38 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Shank2Q80Z38 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC21.28■■□□□ 1
Shank2Q80Z38 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shank2Q80Z38 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shank2Q80Z38 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shank2Q80Z38 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Shank2Q80Z38 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC21.28■■□□□ 1
Shank2Q80Z38 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.27■■□□□ 1
Shank2Q80Z38 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.27■■□□□ 1
Shank2Q80Z38 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC21.27■■□□□ 1
Shank2Q80Z38 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shank2Q80Z38 AA543401-201ENSMUST00000164248 1269 ntBASIC21.27■■□□□ 1
Shank2Q80Z38 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC21.27■■□□□ 1
Shank2Q80Z38 AC139382.1-201ENSMUST00000221402 498 ntBASIC21.27■■□□□ 1
Shank2Q80Z38 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Shank2Q80Z38 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC21.27■■□□□ 1
Shank2Q80Z38 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shank2Q80Z38 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC21.27■■□□□ 1
Shank2Q80Z38 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC21.27■■□□□ 1
Shank2Q80Z38 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.27■■□□□ 1
Shank2Q80Z38 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shank2Q80Z38 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Shank2Q80Z38 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Shank2Q80Z38 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Shank2Q80Z38 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC21.26■□□□□ 0.99
Shank2Q80Z38 AC131709.1-201ENSMUST00000224731 1180 ntBASIC21.26■□□□□ 0.99
Shank2Q80Z38 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shank2Q80Z38 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms