Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Usp6nlQ80XC3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp6nlQ80XC3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp6nlQ80XC3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp6nlQ80XC3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.27■□□□□ 0.52
Usp6nlQ80XC3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp6nlQ80XC3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp6nlQ80XC3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Usp6nlQ80XC3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp6nlQ80XC3 Gm12350-201ENSMUST00000121208 462 ntBASIC18.27■□□□□ 0.52
Usp6nlQ80XC3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Usp6nlQ80XC3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp6nlQ80XC3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.27■□□□□ 0.52
Usp6nlQ80XC3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.27■□□□□ 0.52
Usp6nlQ80XC3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Usp6nlQ80XC3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Usp6nlQ80XC3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Usp6nlQ80XC3 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.27■□□□□ 0.51
Usp6nlQ80XC3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Usp6nlQ80XC3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Usp6nlQ80XC3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Gm37935-201ENSMUST00000192012 982 ntBASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.26■□□□□ 0.51
Usp6nlQ80XC3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp6nlQ80XC3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Gm25925-201ENSMUST00000158314 306 ntBASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp6nlQ80XC3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp6nlQ80XC3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp6nlQ80XC3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp6nlQ80XC3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.23■□□□□ 0.51
Usp6nlQ80XC3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp6nlQ80XC3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms