Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Gm2651-201ENSMUST00000203560 838 ntBASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.1■□□□□ 0.65
Prpf40bQ80W14 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40bQ80W14 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf40bQ80W14 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Prpf40bQ80W14 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf40bQ80W14 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf40bQ80W14 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf40bQ80W14 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf40bQ80W14 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf40bQ80W14 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf40bQ80W14 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.09■□□□□ 0.65
Prpf40bQ80W14 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf40bQ80W14 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.09■□□□□ 0.65
Prpf40bQ80W14 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf40bQ80W14 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf40bQ80W14 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf40bQ80W14 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf40bQ80W14 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.08■□□□□ 0.65
Prpf40bQ80W14 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf40bQ80W14 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf40bQ80W14 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf40bQ80W14 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf40bQ80W14 Gm11594-201ENSMUST00000122313 162 ntBASIC19.08■□□□□ 0.64
Prpf40bQ80W14 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf40bQ80W14 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf40bQ80W14 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Prpf40bQ80W14 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Prpf40bQ80W14 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf40bQ80W14 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.08■□□□□ 0.64
Prpf40bQ80W14 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.08■□□□□ 0.64
Prpf40bQ80W14 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Prpf40bQ80W14 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf40bQ80W14 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf40bQ80W14 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf40bQ80W14 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Prpf40bQ80W14 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf40bQ80W14 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf40bQ80W14 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.07■□□□□ 0.64
Prpf40bQ80W14 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf40bQ80W14 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf40bQ80W14 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf40bQ80W14 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf40bQ80W14 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.06■□□□□ 0.64
Prpf40bQ80W14 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf40bQ80W14 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf40bQ80W14 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf40bQ80W14 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf40bQ80W14 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf40bQ80W14 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Prpf40bQ80W14 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.06■□□□□ 0.64
Prpf40bQ80W14 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.06■□□□□ 0.64
Prpf40bQ80W14 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Prpf40bQ80W14 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf40bQ80W14 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf40bQ80W14 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf40bQ80W14 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf40bQ80W14 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf40bQ80W14 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf40bQ80W14 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf40bQ80W14 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf40bQ80W14 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Prpf40bQ80W14 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf40bQ80W14 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf40bQ80W14 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf40bQ80W14 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms