Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim62Q80V85 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim62Q80V85 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim62Q80V85 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim62Q80V85 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim62Q80V85 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.17■□□□□ 0.34
Trim62Q80V85 Gm29518-201ENSMUST00000190858 372 ntBASIC17.17■□□□□ 0.34
Trim62Q80V85 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.17■□□□□ 0.34
Trim62Q80V85 Gm17808-201ENSMUST00000200859 894 ntBASIC17.17■□□□□ 0.34
Trim62Q80V85 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim62Q80V85 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim62Q80V85 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim62Q80V85 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim62Q80V85 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim62Q80V85 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim62Q80V85 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim62Q80V85 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.16■□□□□ 0.34
Trim62Q80V85 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim62Q80V85 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim62Q80V85 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim62Q80V85 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim62Q80V85 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim62Q80V85 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Trim62Q80V85 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.16■□□□□ 0.34
Trim62Q80V85 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.16■□□□□ 0.34
Trim62Q80V85 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim62Q80V85 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim62Q80V85 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim62Q80V85 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim62Q80V85 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trim62Q80V85 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim62Q80V85 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.16■□□□□ 0.34
Trim62Q80V85 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.16■□□□□ 0.34
Trim62Q80V85 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.16■□□□□ 0.34
Trim62Q80V85 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim62Q80V85 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim62Q80V85 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim62Q80V85 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim62Q80V85 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim62Q80V85 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim62Q80V85 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim62Q80V85 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim62Q80V85 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim62Q80V85 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim62Q80V85 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim62Q80V85 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim62Q80V85 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Trim62Q80V85 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.15■□□□□ 0.34
Trim62Q80V85 Gm33142-201ENSMUST00000193913 867 ntBASIC17.15■□□□□ 0.34
Trim62Q80V85 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim62Q80V85 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim62Q80V85 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trim62Q80V85 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim62Q80V85 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim62Q80V85 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.15■□□□□ 0.34
Trim62Q80V85 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Trim62Q80V85 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim62Q80V85 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Trim62Q80V85 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim62Q80V85 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim62Q80V85 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim62Q80V85 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim62Q80V85 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim62Q80V85 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Trim62Q80V85 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Trim62Q80V85 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim62Q80V85 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim62Q80V85 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.14■□□□□ 0.33
Trim62Q80V85 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim62Q80V85 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim62Q80V85 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim62Q80V85 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim62Q80V85 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim62Q80V85 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim62Q80V85 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim62Q80V85 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim62Q80V85 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim62Q80V85 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim62Q80V85 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim62Q80V85 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim62Q80V85 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim62Q80V85 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim62Q80V85 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim62Q80V85 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim62Q80V85 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim62Q80V85 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.13■□□□□ 0.33
Trim62Q80V85 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim62Q80V85 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim62Q80V85 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim62Q80V85 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim62Q80V85 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim62Q80V85 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim62Q80V85 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim62Q80V85 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim62Q80V85 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Trim62Q80V85 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim62Q80V85 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim62Q80V85 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim62Q80V85 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim62Q80V85 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms