Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpp38Q80UU2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp38Q80UU2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp38Q80UU2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Gm36967-201ENSMUST00000193814 266 ntBASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp38Q80UU2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Mir7071-201ENSMUST00000184847 69 ntBASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp38Q80UU2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Gm9013-201ENSMUST00000132939 882 ntBASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms