Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rpap1Q80TE0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
Rpap1Q80TE0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Rpap1Q80TE0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rpap1Q80TE0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rpap1Q80TE0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rpap1Q80TE0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC25.66■■□□□ 1.7
Rpap1Q80TE0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC25.66■■□□□ 1.7
Rpap1Q80TE0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
Rpap1Q80TE0 Gm7063-201ENSMUST00000186840 981 ntBASIC25.66■■□□□ 1.7
Rpap1Q80TE0 Gm45683-201ENSMUST00000210825 1247 ntBASIC25.66■■□□□ 1.7
Rpap1Q80TE0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rpap1Q80TE0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rpap1Q80TE0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rpap1Q80TE0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rpap1Q80TE0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rpap1Q80TE0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Rpap1Q80TE0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rpap1Q80TE0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Rpap1Q80TE0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC25.65■■□□□ 1.7
Rpap1Q80TE0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Rpap1Q80TE0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC25.65■■□□□ 1.7
Rpap1Q80TE0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rpap1Q80TE0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rpap1Q80TE0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rpap1Q80TE0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rpap1Q80TE0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Rpap1Q80TE0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rpap1Q80TE0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rpap1Q80TE0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.7
Rpap1Q80TE0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC25.64■■□□□ 1.69
Rpap1Q80TE0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
Rpap1Q80TE0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
Rpap1Q80TE0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Rpap1Q80TE0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Auts2-212ENSMUST00000178555 309 ntBASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Rpap1Q80TE0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Rpap1Q80TE0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Rpap1Q80TE0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rpap1Q80TE0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rpap1Q80TE0 Gm7222-201ENSMUST00000117512 906 ntBASIC25.62■■□□□ 1.69
Rpap1Q80TE0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Rpap1Q80TE0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Rpap1Q80TE0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC25.62■■□□□ 1.69
Rpap1Q80TE0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rpap1Q80TE0 Gm3928-201ENSMUST00000121141 1307 ntBASIC25.61■■□□□ 1.69
Rpap1Q80TE0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Rpap1Q80TE0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC25.61■■□□□ 1.69
Rpap1Q80TE0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rpap1Q80TE0 Gm10576-201ENSMUST00000191927 825 ntBASIC25.61■■□□□ 1.69
Rpap1Q80TE0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC25.61■■□□□ 1.69
Rpap1Q80TE0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Rpap1Q80TE0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Rpap1Q80TE0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rpap1Q80TE0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC25.6■■□□□ 1.69
Rpap1Q80TE0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rpap1Q80TE0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Rpap1Q80TE0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rpap1Q80TE0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Rpap1Q80TE0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rpap1Q80TE0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Rpap1Q80TE0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Rpap1Q80TE0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Rpap1Q80TE0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Rpap1Q80TE0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC25.59■■□□□ 1.69
Rpap1Q80TE0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
Rpap1Q80TE0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC25.59■■□□□ 1.69
Rpap1Q80TE0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC25.59■■□□□ 1.69
Rpap1Q80TE0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rpap1Q80TE0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
Rpap1Q80TE0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Rpap1Q80TE0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rpap1Q80TE0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rpap1Q80TE0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rpap1Q80TE0 Gm5648-201ENSMUST00000122244 1587 ntBASIC25.58■■□□□ 1.69
Rpap1Q80TE0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Rpap1Q80TE0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Rpap1Q80TE0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rpap1Q80TE0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rpap1Q80TE0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rpap1Q80TE0 AC151286.1-201ENSMUST00000198489 145 ntBASIC25.58■■□□□ 1.69
Rpap1Q80TE0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC25.58■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms