Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pif1Q80SX8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Gm10052-201ENSMUST00000168019 960 ntBASIC15.26■□□□□ 0.03
Pif1Q80SX8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Gm7729-201ENSMUST00000050143 801 ntBASIC15.26■□□□□ 0.03
Pif1Q80SX8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.26■□□□□ 0.03
Pif1Q80SX8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.26■□□□□ 0.03
Pif1Q80SX8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pif1Q80SX8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pif1Q80SX8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.24■□□□□ 0.03
Pif1Q80SX8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Pif1Q80SX8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 AC153937.1-201ENSMUST00000218734 412 ntBASIC15.24■□□□□ 0.03
Pif1Q80SX8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pif1Q80SX8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pif1Q80SX8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pif1Q80SX8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pif1Q80SX8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pif1Q80SX8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pif1Q80SX8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pif1Q80SX8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pif1Q80SX8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pif1Q80SX8 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.23■□□□□ 0.03
Pif1Q80SX8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.23■□□□□ 0.03
Pif1Q80SX8 Gm15372-201ENSMUST00000120729 834 ntBASIC15.23■□□□□ 0.03
Pif1Q80SX8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.23■□□□□ 0.03
Pif1Q80SX8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pif1Q80SX8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Pif1Q80SX8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Pif1Q80SX8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms