Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3d21Q7TSG5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3d21Q7TSG5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3d21Q7TSG5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3d21Q7TSG5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3d21Q7TSG5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3d21Q7TSG5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sh3d21Q7TSG5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3d21Q7TSG5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sh3d21Q7TSG5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3d21Q7TSG5 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3d21Q7TSG5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3d21Q7TSG5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3d21Q7TSG5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3d21Q7TSG5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Sh3d21Q7TSG5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3d21Q7TSG5 Mir7071-201ENSMUST00000184847 69 ntBASIC18.14■□□□□ 0.49
Sh3d21Q7TSG5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.14■□□□□ 0.49
Sh3d21Q7TSG5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3d21Q7TSG5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3d21Q7TSG5 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3d21Q7TSG5 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.14■□□□□ 0.49
Sh3d21Q7TSG5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3d21Q7TSG5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Gm9987-201ENSMUST00000069768 567 ntBASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3d21Q7TSG5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms