Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf139Q7TMV1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf139Q7TMV1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rnf139Q7TMV1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf139Q7TMV1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rnf139Q7TMV1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf139Q7TMV1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf139Q7TMV1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf139Q7TMV1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf139Q7TMV1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rnf139Q7TMV1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf139Q7TMV1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf139Q7TMV1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf139Q7TMV1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf139Q7TMV1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf139Q7TMV1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.74■□□□□ 0.43
Rnf139Q7TMV1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf139Q7TMV1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.74■□□□□ 0.43
Rnf139Q7TMV1 Gm9013-201ENSMUST00000132939 882 ntBASIC17.74■□□□□ 0.43
Rnf139Q7TMV1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.74■□□□□ 0.43
Rnf139Q7TMV1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Rnf139Q7TMV1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf139Q7TMV1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf139Q7TMV1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf139Q7TMV1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Gm5587-201ENSMUST00000206270 674 ntBASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf139Q7TMV1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.72■□□□□ 0.43
Rnf139Q7TMV1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Mir770-201ENSMUST00000103252 94 ntBASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 AA414768-201ENSMUST00000121924 1257 ntBASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Haglr-201ENSMUST00000100000 2085 ntBASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf139Q7TMV1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms