Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gm13884-201ENSMUST00000118103 829 ntBASIC17.16■□□□□ 0.34
Cspg5Q71M36 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Gm43514-201ENSMUST00000198852 424 ntBASIC17.16■□□□□ 0.34
Cspg5Q71M36 Gm45328-201ENSMUST00000210942 917 ntBASIC17.16■□□□□ 0.34
Cspg5Q71M36 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.16■□□□□ 0.34
Cspg5Q71M36 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Mir8098-201ENSMUST00000184011 137 ntBASIC17.15■□□□□ 0.34
Cspg5Q71M36 Gm43347-201ENSMUST00000200226 580 ntBASIC17.15■□□□□ 0.34
Cspg5Q71M36 Gm6443-201ENSMUST00000203599 874 ntBASIC17.15■□□□□ 0.34
Cspg5Q71M36 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.15■□□□□ 0.34
Cspg5Q71M36 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.15■□□□□ 0.34
Cspg5Q71M36 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.15■□□□□ 0.34
Cspg5Q71M36 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.15■□□□□ 0.34
Cspg5Q71M36 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cspg5Q71M36 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.14■□□□□ 0.34
Cspg5Q71M36 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cspg5Q71M36 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.14■□□□□ 0.33
Cspg5Q71M36 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Cspg5Q71M36 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg5Q71M36 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg5Q71M36 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms