Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Gm36967-201ENSMUST00000193814 266 ntBASIC19.99■□□□□ 0.79
Sned1Q70E20 Gm45167-201ENSMUST00000208007 322 ntBASIC19.99■□□□□ 0.79
Sned1Q70E20 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Sned1Q70E20 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sned1Q70E20 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sned1Q70E20 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sned1Q70E20 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sned1Q70E20 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sned1Q70E20 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sned1Q70E20 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Sned1Q70E20 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sned1Q70E20 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sned1Q70E20 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
Sned1Q70E20 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Sned1Q70E20 Gm17271-201ENSMUST00000165535 355 ntBASIC19.98■□□□□ 0.79
Sned1Q70E20 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sned1Q70E20 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sned1Q70E20 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.98■□□□□ 0.79
Sned1Q70E20 Gm27494-201ENSMUST00000184735 189 ntBASIC19.98■□□□□ 0.79
Sned1Q70E20 Gm37153-201ENSMUST00000193637 231 ntBASIC19.98■□□□□ 0.79
Sned1Q70E20 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sned1Q70E20 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sned1Q70E20 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sned1Q70E20 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sned1Q70E20 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sned1Q70E20 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sned1Q70E20 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sned1Q70E20 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sned1Q70E20 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.97■□□□□ 0.79
Sned1Q70E20 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sned1Q70E20 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sned1Q70E20 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sned1Q70E20 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.97■□□□□ 0.79
Sned1Q70E20 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Sned1Q70E20 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sned1Q70E20 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sned1Q70E20 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sned1Q70E20 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Sned1Q70E20 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sned1Q70E20 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.96■□□□□ 0.79
Sned1Q70E20 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.96■□□□□ 0.79
Sned1Q70E20 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.96■□□□□ 0.79
Sned1Q70E20 Gm44492-201ENSMUST00000197012 141 ntBASIC19.96■□□□□ 0.79
Sned1Q70E20 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.96■□□□□ 0.79
Sned1Q70E20 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Sned1Q70E20 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.96■□□□□ 0.79
Sned1Q70E20 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sned1Q70E20 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sned1Q70E20 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sned1Q70E20 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Sned1Q70E20 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sned1Q70E20 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sned1Q70E20 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Sned1Q70E20 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sned1Q70E20 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sned1Q70E20 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sned1Q70E20 Mir1895-201ENSMUST00000122615 79 ntBASIC19.95■□□□□ 0.78
Sned1Q70E20 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sned1Q70E20 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sned1Q70E20 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC19.95■□□□□ 0.78
Sned1Q70E20 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sned1Q70E20 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC19.95■□□□□ 0.78
Sned1Q70E20 Mir6404-201ENSMUST00000183699 94 ntBASIC19.95■□□□□ 0.78
Sned1Q70E20 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sned1Q70E20 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sned1Q70E20 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sned1Q70E20 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sned1Q70E20 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Sned1Q70E20 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Sned1Q70E20 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sned1Q70E20 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sned1Q70E20 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sned1Q70E20 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sned1Q70E20 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sned1Q70E20 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.94■□□□□ 0.78
Sned1Q70E20 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sned1Q70E20 Gm8825-201ENSMUST00000182565 998 ntBASIC19.94■□□□□ 0.78
Sned1Q70E20 Gm20949-201ENSMUST00000206478 952 ntBASIC19.94■□□□□ 0.78
Sned1Q70E20 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sned1Q70E20 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sned1Q70E20 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sned1Q70E20 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sned1Q70E20 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.94■□□□□ 0.78
Sned1Q70E20 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sned1Q70E20 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Sned1Q70E20 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Sned1Q70E20 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sned1Q70E20 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sned1Q70E20 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sned1Q70E20 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sned1Q70E20 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.94■□□□□ 0.78
Sned1Q70E20 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sned1Q70E20 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sned1Q70E20 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sned1Q70E20 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sned1Q70E20 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sned1Q70E20 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sned1Q70E20 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.93■□□□□ 0.78
Sned1Q70E20 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sned1Q70E20 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms