Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup188Q6ZQH8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nup188Q6ZQH8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nup188Q6ZQH8 Mir6404-201ENSMUST00000183699 94 ntBASIC19.64■□□□□ 0.73
Nup188Q6ZQH8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nup188Q6ZQH8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup188Q6ZQH8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nup188Q6ZQH8 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.64■□□□□ 0.73
Nup188Q6ZQH8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup188Q6ZQH8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.64■□□□□ 0.73
Nup188Q6ZQH8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.64■□□□□ 0.73
Nup188Q6ZQH8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Nup188Q6ZQH8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Gm11764-201ENSMUST00000120221 623 ntBASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Gm27646-201ENSMUST00000183989 110 ntBASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Gm5186-201ENSMUST00000218781 920 ntBASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup188Q6ZQH8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nup188Q6ZQH8 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Nup188Q6ZQH8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Nup188Q6ZQH8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Nup188Q6ZQH8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup188Q6ZQH8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.61■□□□□ 0.73
Nup188Q6ZQH8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 Gm14057-201ENSMUST00000120631 482 ntBASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.6■□□□□ 0.73
Nup188Q6ZQH8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nup188Q6ZQH8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nup188Q6ZQH8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nup188Q6ZQH8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup188Q6ZQH8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nup188Q6ZQH8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Nup188Q6ZQH8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup188Q6ZQH8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup188Q6ZQH8 Gm27321-201ENSMUST00000185021 205 ntBASIC19.59■□□□□ 0.73
Nup188Q6ZQH8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.59■□□□□ 0.73
Nup188Q6ZQH8 Chchd1-203ENSMUST00000224633 557 ntBASIC19.59■□□□□ 0.73
Nup188Q6ZQH8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup188Q6ZQH8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup188Q6ZQH8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup188Q6ZQH8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup188Q6ZQH8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup188Q6ZQH8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup188Q6ZQH8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup188Q6ZQH8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.58■□□□□ 0.73
Nup188Q6ZQH8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup188Q6ZQH8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nup188Q6ZQH8 AC159114.1-201ENSMUST00000220349 266 ntBASIC19.58■□□□□ 0.73
Nup188Q6ZQH8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms