Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.71■□□□□ 0.59
Scn10aQ6QIY3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn10aQ6QIY3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn10aQ6QIY3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn10aQ6QIY3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn10aQ6QIY3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn10aQ6QIY3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn10aQ6QIY3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.71■□□□□ 0.59
Scn10aQ6QIY3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Scn10aQ6QIY3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.71■□□□□ 0.59
Scn10aQ6QIY3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.71■□□□□ 0.59
Scn10aQ6QIY3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn10aQ6QIY3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn10aQ6QIY3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn10aQ6QIY3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn10aQ6QIY3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Scn10aQ6QIY3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Scn10aQ6QIY3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.7■□□□□ 0.58
Scn10aQ6QIY3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn10aQ6QIY3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn10aQ6QIY3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn10aQ6QIY3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn10aQ6QIY3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn10aQ6QIY3 Gm13597-201ENSMUST00000121239 375 ntBASIC18.69■□□□□ 0.58
Scn10aQ6QIY3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn10aQ6QIY3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn10aQ6QIY3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Scn10aQ6QIY3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn10aQ6QIY3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn10aQ6QIY3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn10aQ6QIY3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn10aQ6QIY3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn10aQ6QIY3 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.69■□□□□ 0.58
Scn10aQ6QIY3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn10aQ6QIY3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn10aQ6QIY3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scn10aQ6QIY3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn10aQ6QIY3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Scn10aQ6QIY3 Gm15920-201ENSMUST00000118998 402 ntBASIC18.67■□□□□ 0.58
Scn10aQ6QIY3 Gm27300-201ENSMUST00000184085 97 ntBASIC18.67■□□□□ 0.58
Scn10aQ6QIY3 Gm27335-201ENSMUST00000184758 97 ntBASIC18.67■□□□□ 0.58
Scn10aQ6QIY3 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms