Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.94□□□□□ -0.18
Rif1Q6PR54 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rif1Q6PR54 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.93□□□□□ -0.18
Rif1Q6PR54 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rif1Q6PR54 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Rif1Q6PR54 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rif1Q6PR54 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rif1Q6PR54 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rif1Q6PR54 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.93□□□□□ -0.18
Rif1Q6PR54 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rif1Q6PR54 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rif1Q6PR54 Gm6912-201ENSMUST00000117218 544 ntBASIC13.93□□□□□ -0.18
Rif1Q6PR54 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rif1Q6PR54 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.93□□□□□ -0.18
Rif1Q6PR54 Gm27430-201ENSMUST00000184585 107 ntBASIC13.93□□□□□ -0.18
Rif1Q6PR54 Gm44333-201ENSMUST00000197168 107 ntBASIC13.93□□□□□ -0.18
Rif1Q6PR54 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rif1Q6PR54 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rif1Q6PR54 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rif1Q6PR54 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rif1Q6PR54 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rif1Q6PR54 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.92□□□□□ -0.18
Rif1Q6PR54 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.92□□□□□ -0.18
Rif1Q6PR54 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rif1Q6PR54 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Gm12497-201ENSMUST00000138778 237 ntBASIC13.91□□□□□ -0.18
Rif1Q6PR54 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rif1Q6PR54 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Gm27301-201ENSMUST00000184012 127 ntBASIC13.9□□□□□ -0.18
Rif1Q6PR54 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms