Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC21.59■■□□□ 1.05
Chd4Q6PDQ2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
Chd4Q6PDQ2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Chd4Q6PDQ2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Chd4Q6PDQ2 Gm43073-201ENSMUST00000198200 1189 ntBASIC21.59■■□□□ 1.05
Chd4Q6PDQ2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chd4Q6PDQ2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chd4Q6PDQ2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Chd4Q6PDQ2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chd4Q6PDQ2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Chd4Q6PDQ2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Chd4Q6PDQ2 Gm5264-201ENSMUST00000190584 848 ntBASIC21.59■■□□□ 1.05
Chd4Q6PDQ2 Gm42670-201ENSMUST00000201816 1292 ntBASIC21.59■■□□□ 1.05
Chd4Q6PDQ2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chd4Q6PDQ2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC21.58■■□□□ 1.05
Chd4Q6PDQ2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Chd4Q6PDQ2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chd4Q6PDQ2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC21.58■■□□□ 1.04
Chd4Q6PDQ2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chd4Q6PDQ2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chd4Q6PDQ2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Chd4Q6PDQ2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chd4Q6PDQ2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chd4Q6PDQ2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Gm14140-201ENSMUST00000119999 995 ntBASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Gm43935-201ENSMUST00000203569 1050 ntBASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 AC117588.1-201ENSMUST00000228510 999 ntBASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Gm5837-201ENSMUST00000191844 1369 ntBASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Gm11594-201ENSMUST00000122313 162 ntBASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Chd4Q6PDQ2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd4Q6PDQ2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd4Q6PDQ2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd4Q6PDQ2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd4Q6PDQ2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd4Q6PDQ2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd4Q6PDQ2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Chd4Q6PDQ2 Gm18856-201ENSMUST00000178096 1374 ntBASIC21.56■■□□□ 1.04
Chd4Q6PDQ2 Gm15743-202ENSMUST00000182690 1901 ntBASIC21.56■■□□□ 1.04
Chd4Q6PDQ2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd4Q6PDQ2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Chd4Q6PDQ2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd4Q6PDQ2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd4Q6PDQ2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Chd4Q6PDQ2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd4Q6PDQ2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd4Q6PDQ2 Gm6184-201ENSMUST00000120403 1261 ntBASIC21.55■■□□□ 1.04
Chd4Q6PDQ2 Gm12260-201ENSMUST00000122447 411 ntBASIC21.55■■□□□ 1.04
Chd4Q6PDQ2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Chd4Q6PDQ2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd4Q6PDQ2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd4Q6PDQ2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd4Q6PDQ2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd4Q6PDQ2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Chd4Q6PDQ2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd4Q6PDQ2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC21.54■■□□□ 1.04
Chd4Q6PDQ2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC21.54■■□□□ 1.04
Chd4Q6PDQ2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd4Q6PDQ2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Chd4Q6PDQ2 Gm15590-201ENSMUST00000078419 552 ntBASIC21.54■■□□□ 1.04
Chd4Q6PDQ2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC21.54■■□□□ 1.04
Chd4Q6PDQ2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 Gm37935-201ENSMUST00000192012 982 ntBASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 AV026068-213ENSMUST00000223675 1171 ntBASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC21.53■■□□□ 1.04
Chd4Q6PDQ2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms