Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ShbQ6PD21 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ShbQ6PD21 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ShbQ6PD21 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ShbQ6PD21 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ShbQ6PD21 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.9■□□□□ 0.46
ShbQ6PD21 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.9■□□□□ 0.46
ShbQ6PD21 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
ShbQ6PD21 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
ShbQ6PD21 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
ShbQ6PD21 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ShbQ6PD21 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ShbQ6PD21 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.89■□□□□ 0.45
ShbQ6PD21 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.89■□□□□ 0.45
ShbQ6PD21 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ShbQ6PD21 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ShbQ6PD21 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.89■□□□□ 0.45
ShbQ6PD21 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ShbQ6PD21 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ShbQ6PD21 Gm20949-201ENSMUST00000206478 952 ntBASIC17.89■□□□□ 0.45
ShbQ6PD21 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ShbQ6PD21 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ShbQ6PD21 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ShbQ6PD21 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ShbQ6PD21 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ShbQ6PD21 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ShbQ6PD21 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ShbQ6PD21 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ShbQ6PD21 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ShbQ6PD21 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ShbQ6PD21 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShbQ6PD21 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShbQ6PD21 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShbQ6PD21 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShbQ6PD21 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShbQ6PD21 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShbQ6PD21 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.88■□□□□ 0.45
ShbQ6PD21 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ShbQ6PD21 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ShbQ6PD21 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.88■□□□□ 0.45
ShbQ6PD21 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.88■□□□□ 0.45
ShbQ6PD21 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShbQ6PD21 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.88■□□□□ 0.45
ShbQ6PD21 Gm45167-201ENSMUST00000208007 322 ntBASIC17.88■□□□□ 0.45
ShbQ6PD21 Gm18622-201ENSMUST00000219361 595 ntBASIC17.88■□□□□ 0.45
ShbQ6PD21 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ShbQ6PD21 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShbQ6PD21 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ShbQ6PD21 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShbQ6PD21 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
ShbQ6PD21 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShbQ6PD21 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ShbQ6PD21 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ShbQ6PD21 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShbQ6PD21 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShbQ6PD21 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ShbQ6PD21 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ShbQ6PD21 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShbQ6PD21 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShbQ6PD21 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
ShbQ6PD21 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShbQ6PD21 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.87■□□□□ 0.45
ShbQ6PD21 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShbQ6PD21 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.87■□□□□ 0.45
ShbQ6PD21 Gm4899-201ENSMUST00000178708 719 ntBASIC17.87■□□□□ 0.45
ShbQ6PD21 Gm44492-201ENSMUST00000197012 141 ntBASIC17.87■□□□□ 0.45
ShbQ6PD21 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.87■□□□□ 0.45
ShbQ6PD21 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.87■□□□□ 0.45
ShbQ6PD21 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ShbQ6PD21 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ShbQ6PD21 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShbQ6PD21 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ShbQ6PD21 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShbQ6PD21 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShbQ6PD21 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShbQ6PD21 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.87■□□□□ 0.45
ShbQ6PD21 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShbQ6PD21 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShbQ6PD21 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ShbQ6PD21 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.87■□□□□ 0.45
ShbQ6PD21 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.86■□□□□ 0.45
ShbQ6PD21 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ShbQ6PD21 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ShbQ6PD21 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShbQ6PD21 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShbQ6PD21 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ShbQ6PD21 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.86■□□□□ 0.45
ShbQ6PD21 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.86■□□□□ 0.45
ShbQ6PD21 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ShbQ6PD21 Gm43438-201ENSMUST00000198133 379 ntBASIC17.86■□□□□ 0.45
ShbQ6PD21 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ShbQ6PD21 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShbQ6PD21 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShbQ6PD21 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ShbQ6PD21 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
ShbQ6PD21 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ShbQ6PD21 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShbQ6PD21 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ShbQ6PD21 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShbQ6PD21 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms