Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim37Q6PCX9 Gm2651-201ENSMUST00000203560 838 ntBASIC18.39■□□□□ 0.53
Trim37Q6PCX9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim37Q6PCX9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim37Q6PCX9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim37Q6PCX9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.39■□□□□ 0.53
Trim37Q6PCX9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim37Q6PCX9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim37Q6PCX9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trim37Q6PCX9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim37Q6PCX9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim37Q6PCX9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim37Q6PCX9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim37Q6PCX9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trim37Q6PCX9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim37Q6PCX9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim37Q6PCX9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Trim37Q6PCX9 Gm13401-201ENSMUST00000117074 291 ntBASIC18.38■□□□□ 0.53
Trim37Q6PCX9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim37Q6PCX9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.38■□□□□ 0.53
Trim37Q6PCX9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim37Q6PCX9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim37Q6PCX9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.38■□□□□ 0.53
Trim37Q6PCX9 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.38■□□□□ 0.53
Trim37Q6PCX9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Trim37Q6PCX9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim37Q6PCX9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim37Q6PCX9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim37Q6PCX9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim37Q6PCX9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trim37Q6PCX9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim37Q6PCX9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim37Q6PCX9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim37Q6PCX9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim37Q6PCX9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim37Q6PCX9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim37Q6PCX9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim37Q6PCX9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim37Q6PCX9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim37Q6PCX9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim37Q6PCX9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim37Q6PCX9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.36■□□□□ 0.53
Trim37Q6PCX9 Il3ra-202ENSMUST00000223589 738 ntBASIC18.36■□□□□ 0.53
Trim37Q6PCX9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.36■□□□□ 0.53
Trim37Q6PCX9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim37Q6PCX9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim37Q6PCX9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim37Q6PCX9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.36■□□□□ 0.53
Trim37Q6PCX9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim37Q6PCX9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim37Q6PCX9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim37Q6PCX9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Gm8000-201ENSMUST00000188378 592 ntBASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Gm9731-201ENSMUST00000209480 747 ntBASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim37Q6PCX9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms