Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb4Q6P8W9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Gm45328-201ENSMUST00000210942 917 ntBASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb4Q6P8W9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Gm7153-201ENSMUST00000117092 455 ntBASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb4Q6P8W9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmgb4Q6P8W9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmgb4Q6P8W9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hmgb4Q6P8W9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmgb4Q6P8W9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Hmgb4Q6P8W9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hmgb4Q6P8W9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb4Q6P8W9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Hmgb4Q6P8W9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb4Q6P8W9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb4Q6P8W9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Hmgb4Q6P8W9 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.33■□□□□ 0.36
Hmgb4Q6P8W9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb4Q6P8W9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb4Q6P8W9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb4Q6P8W9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Hmgb4Q6P8W9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Hmgb4Q6P8W9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb4Q6P8W9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb4Q6P8W9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb4Q6P8W9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 Gm27000-201ENSMUST00000182943 842 ntBASIC17.32■□□□□ 0.36
Hmgb4Q6P8W9 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms