Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Casc4Q6P2L7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Gm18032-201ENSMUST00000222541 538 ntBASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Casc4Q6P2L7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Casc4Q6P2L7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Casc4Q6P2L7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Casc4Q6P2L7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.77■□□□□ 0.28
Casc4Q6P2L7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Casc4Q6P2L7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Casc4Q6P2L7 Actl10-202ENSMUST00000226583 1501 ntBASIC16.77■□□□□ 0.28
Casc4Q6P2L7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Casc4Q6P2L7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Casc4Q6P2L7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Casc4Q6P2L7 Gm27389-201ENSMUST00000183622 195 ntBASIC16.77■□□□□ 0.28
Casc4Q6P2L7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.77■□□□□ 0.28
Casc4Q6P2L7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Casc4Q6P2L7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Casc4Q6P2L7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Casc4Q6P2L7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Casc4Q6P2L7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Casc4Q6P2L7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.77■□□□□ 0.27
Casc4Q6P2L7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Casc4Q6P2L7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.76■□□□□ 0.27
Casc4Q6P2L7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Casc4Q6P2L7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Casc4Q6P2L7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Casc4Q6P2L7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Casc4Q6P2L7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.76■□□□□ 0.27
Casc4Q6P2L7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Casc4Q6P2L7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Casc4Q6P2L7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Casc4Q6P2L7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Casc4Q6P2L7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Casc4Q6P2L7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.76■□□□□ 0.27
Casc4Q6P2L7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Casc4Q6P2L7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Casc4Q6P2L7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Casc4Q6P2L7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms