Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtl3Q6P1Y1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rtl3Q6P1Y1 Gm27704-201ENSMUST00000185094 107 ntBASIC17.15■□□□□ 0.34
Rtl3Q6P1Y1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtl3Q6P1Y1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtl3Q6P1Y1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rtl3Q6P1Y1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.15■□□□□ 0.34
Rtl3Q6P1Y1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtl3Q6P1Y1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtl3Q6P1Y1 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.15■□□□□ 0.34
Rtl3Q6P1Y1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtl3Q6P1Y1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtl3Q6P1Y1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rtl3Q6P1Y1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl3Q6P1Y1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl3Q6P1Y1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtl3Q6P1Y1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.12■□□□□ 0.33
Rtl3Q6P1Y1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.12■□□□□ 0.33
Rtl3Q6P1Y1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.12■□□□□ 0.33
Rtl3Q6P1Y1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtl3Q6P1Y1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.12■□□□□ 0.33
Rtl3Q6P1Y1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rtl3Q6P1Y1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rtl3Q6P1Y1 Gm44450-201ENSMUST00000199528 114 ntBASIC17.12■□□□□ 0.33
Rtl3Q6P1Y1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtl3Q6P1Y1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rtl3Q6P1Y1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtl3Q6P1Y1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtl3Q6P1Y1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Mir770-201ENSMUST00000103252 94 ntBASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Gm17971-201ENSMUST00000190239 806 ntBASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Gm29518-201ENSMUST00000190858 372 ntBASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl3Q6P1Y1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl3Q6P1Y1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms