Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Krt39Q6IFX4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt39Q6IFX4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Krt39Q6IFX4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Krt39Q6IFX4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Krt39Q6IFX4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.36■□□□□ 0.53
Krt39Q6IFX4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Krt39Q6IFX4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt39Q6IFX4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt39Q6IFX4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Krt39Q6IFX4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Krt39Q6IFX4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt39Q6IFX4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Krt39Q6IFX4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.35■□□□□ 0.53
Krt39Q6IFX4 Il3ra-202ENSMUST00000223589 738 ntBASIC18.35■□□□□ 0.53
Krt39Q6IFX4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt39Q6IFX4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Krt39Q6IFX4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Krt39Q6IFX4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Krt39Q6IFX4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.35■□□□□ 0.53
Krt39Q6IFX4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt39Q6IFX4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Krt39Q6IFX4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt39Q6IFX4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Krt39Q6IFX4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt39Q6IFX4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.34■□□□□ 0.53
Krt39Q6IFX4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt39Q6IFX4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt39Q6IFX4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.34■□□□□ 0.53
Krt39Q6IFX4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.34■□□□□ 0.53
Krt39Q6IFX4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt39Q6IFX4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Krt39Q6IFX4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Krt39Q6IFX4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt39Q6IFX4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt39Q6IFX4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt39Q6IFX4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.34■□□□□ 0.53
Krt39Q6IFX4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Krt39Q6IFX4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Krt39Q6IFX4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Krt39Q6IFX4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Krt39Q6IFX4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Krt39Q6IFX4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt39Q6IFX4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt39Q6IFX4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Krt39Q6IFX4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt39Q6IFX4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.33■□□□□ 0.52
Krt39Q6IFX4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Krt39Q6IFX4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.33■□□□□ 0.52
Krt39Q6IFX4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt39Q6IFX4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt39Q6IFX4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt39Q6IFX4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt39Q6IFX4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt39Q6IFX4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krt39Q6IFX4 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Krt39Q6IFX4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krt39Q6IFX4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Krt39Q6IFX4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.3■□□□□ 0.52
Krt39Q6IFX4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Krt39Q6IFX4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Krt39Q6IFX4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.3■□□□□ 0.52
Krt39Q6IFX4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms