Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Krt40Q6IFX3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Krt40Q6IFX3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Krt40Q6IFX3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krt40Q6IFX3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Krt40Q6IFX3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krt40Q6IFX3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Krt40Q6IFX3 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.47■□□□□ 0.71
Krt40Q6IFX3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
Krt40Q6IFX3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krt40Q6IFX3 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.47■□□□□ 0.71
Krt40Q6IFX3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.47■□□□□ 0.71
Krt40Q6IFX3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.47■□□□□ 0.71
Krt40Q6IFX3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krt40Q6IFX3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.47■□□□□ 0.71
Krt40Q6IFX3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krt40Q6IFX3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.47■□□□□ 0.71
Krt40Q6IFX3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krt40Q6IFX3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.46■□□□□ 0.71
Krt40Q6IFX3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt40Q6IFX3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt40Q6IFX3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt40Q6IFX3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt40Q6IFX3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt40Q6IFX3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt40Q6IFX3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.46■□□□□ 0.71
Krt40Q6IFX3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt40Q6IFX3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.46■□□□□ 0.71
Krt40Q6IFX3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Krt40Q6IFX3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.46■□□□□ 0.71
Krt40Q6IFX3 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.46■□□□□ 0.71
Krt40Q6IFX3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt40Q6IFX3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt40Q6IFX3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt40Q6IFX3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt40Q6IFX3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Krt40Q6IFX3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.7
Krt40Q6IFX3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt40Q6IFX3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt40Q6IFX3 Gm15165-201ENSMUST00000118140 502 ntBASIC19.45■□□□□ 0.7
Krt40Q6IFX3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Krt40Q6IFX3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.45■□□□□ 0.7
Krt40Q6IFX3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.45■□□□□ 0.7
Krt40Q6IFX3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt40Q6IFX3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt40Q6IFX3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.45■□□□□ 0.7
Krt40Q6IFX3 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.45■□□□□ 0.7
Krt40Q6IFX3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt40Q6IFX3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt40Q6IFX3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt40Q6IFX3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt40Q6IFX3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.45■□□□□ 0.7
Krt40Q6IFX3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Krt40Q6IFX3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt40Q6IFX3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt40Q6IFX3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt40Q6IFX3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Krt40Q6IFX3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Krt40Q6IFX3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.44■□□□□ 0.7
Krt40Q6IFX3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.44■□□□□ 0.7
Krt40Q6IFX3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt40Q6IFX3 Gm12644-201ENSMUST00000119935 606 ntBASIC19.44■□□□□ 0.7
Krt40Q6IFX3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt40Q6IFX3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.44■□□□□ 0.7
Krt40Q6IFX3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt40Q6IFX3 Gm7461-201ENSMUST00000058918 827 ntBASIC19.44■□□□□ 0.7
Krt40Q6IFX3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt40Q6IFX3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt40Q6IFX3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Krt40Q6IFX3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Gm27867-201ENSMUST00000184778 125 ntBASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt40Q6IFX3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt40Q6IFX3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.42■□□□□ 0.7
Krt40Q6IFX3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt40Q6IFX3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Krt40Q6IFX3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt40Q6IFX3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms