Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Clcn1Q64347 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn1Q64347 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Clcn1Q64347 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Clcn1Q64347 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Clcn1Q64347 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn1Q64347 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Clcn1Q64347 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn1Q64347 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC20.93■□□□□ 0.94
Clcn1Q64347 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn1Q64347 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Clcn1Q64347 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn1Q64347 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Clcn1Q64347 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn1Q64347 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.93■□□□□ 0.94
Clcn1Q64347 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.93■□□□□ 0.94
Clcn1Q64347 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Clcn1Q64347 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn1Q64347 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn1Q64347 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn1Q64347 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn1Q64347 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Clcn1Q64347 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Clcn1Q64347 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn1Q64347 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn1Q64347 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn1Q64347 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn1Q64347 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn1Q64347 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.92■□□□□ 0.94
Clcn1Q64347 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn1Q64347 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn1Q64347 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn1Q64347 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC20.92■□□□□ 0.94
Clcn1Q64347 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.92■□□□□ 0.94
Clcn1Q64347 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Clcn1Q64347 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Clcn1Q64347 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn1Q64347 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.92■□□□□ 0.94
Clcn1Q64347 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn1Q64347 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn1Q64347 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn1Q64347 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.91■□□□□ 0.94
Clcn1Q64347 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn1Q64347 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Clcn1Q64347 Rprl3-201ENSMUST00000157400 290 ntBASIC20.91■□□□□ 0.94
Clcn1Q64347 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn1Q64347 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn1Q64347 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn1Q64347 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn1Q64347 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn1Q64347 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.91■□□□□ 0.94
Clcn1Q64347 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn1Q64347 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn1Q64347 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn1Q64347 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn1Q64347 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Clcn1Q64347 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn1Q64347 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn1Q64347 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.9■□□□□ 0.94
Clcn1Q64347 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn1Q64347 Gm15165-201ENSMUST00000118140 502 ntBASIC20.9■□□□□ 0.94
Clcn1Q64347 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn1Q64347 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn1Q64347 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.9■□□□□ 0.94
Clcn1Q64347 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn1Q64347 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.9■□□□□ 0.94
Clcn1Q64347 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn1Q64347 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn1Q64347 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn1Q64347 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.9■□□□□ 0.94
Clcn1Q64347 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.89■□□□□ 0.94
Clcn1Q64347 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.89■□□□□ 0.94
Clcn1Q64347 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.89■□□□□ 0.94
Clcn1Q64347 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn1Q64347 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Clcn1Q64347 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn1Q64347 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn1Q64347 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Clcn1Q64347 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn1Q64347 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn1Q64347 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn1Q64347 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.88■□□□□ 0.93
Clcn1Q64347 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 Gm1401-201ENSMUST00000122048 772 ntBASIC20.88■□□□□ 0.93
Clcn1Q64347 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.88■□□□□ 0.93
Clcn1Q64347 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn1Q64347 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.88■□□□□ 0.93
Clcn1Q64347 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms