Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.72□□□□□ -0.21
Col7a1Q63870 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.72□□□□□ -0.21
Col7a1Q63870 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.72□□□□□ -0.21
Col7a1Q63870 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.72□□□□□ -0.21
Col7a1Q63870 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col7a1Q63870 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col7a1Q63870 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Col7a1Q63870 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Col7a1Q63870 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col7a1Q63870 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col7a1Q63870 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col7a1Q63870 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.72□□□□□ -0.21
Col7a1Q63870 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Col7a1Q63870 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.72□□□□□ -0.21
Col7a1Q63870 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col7a1Q63870 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.72□□□□□ -0.21
Col7a1Q63870 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col7a1Q63870 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col7a1Q63870 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col7a1Q63870 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col7a1Q63870 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Col7a1Q63870 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.71□□□□□ -0.21
Col7a1Q63870 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Col7a1Q63870 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col7a1Q63870 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col7a1Q63870 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col7a1Q63870 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col7a1Q63870 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col7a1Q63870 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col7a1Q63870 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.71□□□□□ -0.21
Col7a1Q63870 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Col7a1Q63870 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col7a1Q63870 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.71□□□□□ -0.21
Col7a1Q63870 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col7a1Q63870 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col7a1Q63870 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.71□□□□□ -0.22
Col7a1Q63870 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.71□□□□□ -0.22
Col7a1Q63870 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Col7a1Q63870 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Col7a1Q63870 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col7a1Q63870 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col7a1Q63870 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col7a1Q63870 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Col7a1Q63870 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col7a1Q63870 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.71□□□□□ -0.22
Col7a1Q63870 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col7a1Q63870 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.7□□□□□ -0.22
Col7a1Q63870 Rprl2-201ENSMUST00000157150 290 ntBASIC13.7□□□□□ -0.22
Col7a1Q63870 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col7a1Q63870 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.7□□□□□ -0.22
Col7a1Q63870 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col7a1Q63870 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col7a1Q63870 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col7a1Q63870 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col7a1Q63870 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.7□□□□□ -0.22
Col7a1Q63870 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col7a1Q63870 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.7□□□□□ -0.22
Col7a1Q63870 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col7a1Q63870 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col7a1Q63870 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.7□□□□□ -0.22
Col7a1Q63870 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.7□□□□□ -0.22
Col7a1Q63870 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col7a1Q63870 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.7□□□□□ -0.22
Col7a1Q63870 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.7□□□□□ -0.22
Col7a1Q63870 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col7a1Q63870 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col7a1Q63870 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col7a1Q63870 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col7a1Q63870 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col7a1Q63870 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col7a1Q63870 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col7a1Q63870 Gm25406-201ENSMUST00000157599 105 ntBASIC13.7□□□□□ -0.22
Col7a1Q63870 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.7□□□□□ -0.22
Col7a1Q63870 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col7a1Q63870 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.7□□□□□ -0.22
Col7a1Q63870 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col7a1Q63870 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.7□□□□□ -0.22
Col7a1Q63870 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col7a1Q63870 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col7a1Q63870 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col7a1Q63870 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col7a1Q63870 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col7a1Q63870 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col7a1Q63870 Gm20553-201ENSMUST00000204205 844 ntBASIC13.69□□□□□ -0.22
Col7a1Q63870 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col7a1Q63870 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col7a1Q63870 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.69□□□□□ -0.22
Col7a1Q63870 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.69□□□□□ -0.22
Col7a1Q63870 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col7a1Q63870 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col7a1Q63870 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col7a1Q63870 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col7a1Q63870 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.69□□□□□ -0.22
Col7a1Q63870 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col7a1Q63870 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col7a1Q63870 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col7a1Q63870 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col7a1Q63870 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Col7a1Q63870 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col7a1Q63870 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms