Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.07□□□□□ -0.48
Ndufa4Q62425 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.07□□□□□ -0.48
Ndufa4Q62425 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.07□□□□□ -0.48
Ndufa4Q62425 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Mtag2-201ENSMUST00000058665 714 ntBASIC12.07□□□□□ -0.48
Ndufa4Q62425 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.07□□□□□ -0.48
Ndufa4Q62425 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ndufa4Q62425 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Gm5408-201ENSMUST00000197998 747 ntBASIC12.06□□□□□ -0.48
Ndufa4Q62425 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ndufa4Q62425 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.05□□□□□ -0.48
Ndufa4Q62425 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Ndufa4Q62425 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Ndufa4Q62425 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ndufa4Q62425 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms