Protein–RNA interactions for Protein: Q62395

Tff3, Trefoil factor 3, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff3Q62395 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.37□□□□□ -0.11
Tff3Q62395 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff3Q62395 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Tff3Q62395 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff3Q62395 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff3Q62395 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff3Q62395 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff3Q62395 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tff3Q62395 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff3Q62395 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff3Q62395 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff3Q62395 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff3Q62395 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.37□□□□□ -0.11
Tff3Q62395 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff3Q62395 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tff3Q62395 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tff3Q62395 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tff3Q62395 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tff3Q62395 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.36□□□□□ -0.11
Tff3Q62395 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tff3Q62395 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tff3Q62395 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tff3Q62395 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.36□□□□□ -0.11
Tff3Q62395 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.36□□□□□ -0.11
Tff3Q62395 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.36□□□□□ -0.11
Tff3Q62395 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.36□□□□□ -0.11
Tff3Q62395 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tff3Q62395 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tff3Q62395 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.36□□□□□ -0.11
Tff3Q62395 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.36□□□□□ -0.11
Tff3Q62395 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tff3Q62395 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tff3Q62395 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tff3Q62395 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tff3Q62395 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Tff3Q62395 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.35□□□□□ -0.11
Tff3Q62395 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tff3Q62395 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tff3Q62395 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.34□□□□□ -0.11
Tff3Q62395 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Tff3Q62395 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tff3Q62395 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.34□□□□□ -0.11
Tff3Q62395 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.34□□□□□ -0.11
Tff3Q62395 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tff3Q62395 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tff3Q62395 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Tff3Q62395 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Tff3Q62395 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tff3Q62395 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Tff3Q62395 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff3Q62395 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Tff3Q62395 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Tff3Q62395 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff3Q62395 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff3Q62395 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tff3Q62395 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff3Q62395 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff3Q62395 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff3Q62395 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Tff3Q62395 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tff3Q62395 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff3Q62395 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tff3Q62395 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms