Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six2Q62232 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.69■□□□□ 0.42
Six2Q62232 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Six2Q62232 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six2Q62232 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six2Q62232 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six2Q62232 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Six2Q62232 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six2Q62232 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six2Q62232 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six2Q62232 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six2Q62232 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six2Q62232 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.68■□□□□ 0.42
Six2Q62232 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.68■□□□□ 0.42
Six2Q62232 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six2Q62232 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six2Q62232 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six2Q62232 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Six2Q62232 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Six2Q62232 Gm26039-201ENSMUST00000158152 144 ntBASIC17.68■□□□□ 0.42
Six2Q62232 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six2Q62232 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Six2Q62232 Gm18959-201ENSMUST00000208954 655 ntBASIC17.68■□□□□ 0.42
Six2Q62232 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six2Q62232 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Six2Q62232 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six2Q62232 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Six2Q62232 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six2Q62232 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six2Q62232 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.68■□□□□ 0.42
Six2Q62232 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Six2Q62232 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six2Q62232 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six2Q62232 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six2Q62232 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six2Q62232 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.67■□□□□ 0.42
Six2Q62232 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Six2Q62232 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Six2Q62232 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.67■□□□□ 0.42
Six2Q62232 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.67■□□□□ 0.42
Six2Q62232 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.67■□□□□ 0.42
Six2Q62232 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six2Q62232 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six2Q62232 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six2Q62232 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six2Q62232 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.67■□□□□ 0.42
Six2Q62232 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Six2Q62232 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Six2Q62232 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six2Q62232 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six2Q62232 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Six2Q62232 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six2Q62232 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six2Q62232 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Six2Q62232 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.66■□□□□ 0.42
Six2Q62232 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six2Q62232 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six2Q62232 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six2Q62232 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.66■□□□□ 0.42
Six2Q62232 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Six2Q62232 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Six2Q62232 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.66■□□□□ 0.42
Six2Q62232 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Six2Q62232 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Six2Q62232 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six2Q62232 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six2Q62232 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six2Q62232 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Six2Q62232 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six2Q62232 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Six2Q62232 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six2Q62232 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six2Q62232 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Six2Q62232 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.65■□□□□ 0.42
Six2Q62232 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Six2Q62232 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.65■□□□□ 0.42
Six2Q62232 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.65■□□□□ 0.42
Six2Q62232 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Six2Q62232 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.65■□□□□ 0.42
Six2Q62232 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.65■□□□□ 0.42
Six2Q62232 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Six2Q62232 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six2Q62232 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms