Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim27Q62158 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Trim27Q62158 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim27Q62158 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Trim27Q62158 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim27Q62158 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim27Q62158 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim27Q62158 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim27Q62158 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Trim27Q62158 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim27Q62158 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim27Q62158 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim27Q62158 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trim27Q62158 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.39■□□□□ 0.86
Trim27Q62158 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim27Q62158 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim27Q62158 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.39■□□□□ 0.85
Trim27Q62158 Gm37722-201ENSMUST00000193757 208 ntBASIC20.39■□□□□ 0.85
Trim27Q62158 Gm29707-201ENSMUST00000196325 491 ntBASIC20.39■□□□□ 0.85
Trim27Q62158 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.39■□□□□ 0.85
Trim27Q62158 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.39■□□□□ 0.85
Trim27Q62158 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim27Q62158 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim27Q62158 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim27Q62158 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim27Q62158 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim27Q62158 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim27Q62158 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
Trim27Q62158 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim27Q62158 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim27Q62158 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim27Q62158 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim27Q62158 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim27Q62158 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim27Q62158 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.38■□□□□ 0.85
Trim27Q62158 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim27Q62158 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.38■□□□□ 0.85
Trim27Q62158 Gm18101-201ENSMUST00000215769 548 ntBASIC20.38■□□□□ 0.85
Trim27Q62158 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim27Q62158 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim27Q62158 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Trim27Q62158 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim27Q62158 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.38■□□□□ 0.85
Trim27Q62158 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Trim27Q62158 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Trim27Q62158 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trim27Q62158 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim27Q62158 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim27Q62158 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim27Q62158 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim27Q62158 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim27Q62158 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.37■□□□□ 0.85
Trim27Q62158 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Trim27Q62158 Gm27389-201ENSMUST00000183622 195 ntBASIC20.37■□□□□ 0.85
Trim27Q62158 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim27Q62158 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim27Q62158 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim27Q62158 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim27Q62158 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim27Q62158 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim27Q62158 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim27Q62158 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.36■□□□□ 0.85
Trim27Q62158 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trim27Q62158 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC20.36■□□□□ 0.85
Trim27Q62158 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.36■□□□□ 0.85
Trim27Q62158 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Trim27Q62158 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trim27Q62158 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Trim27Q62158 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Trim27Q62158 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.36■□□□□ 0.85
Trim27Q62158 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.36■□□□□ 0.85
Trim27Q62158 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Trim27Q62158 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim27Q62158 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim27Q62158 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim27Q62158 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim27Q62158 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Trim27Q62158 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Trim27Q62158 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.35■□□□□ 0.85
Trim27Q62158 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Trim27Q62158 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim27Q62158 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim27Q62158 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms