Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VcanQ62059 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
VcanQ62059 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.53■□□□□ 0.08
VcanQ62059 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VcanQ62059 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VcanQ62059 Gm15653-201ENSMUST00000119247 907 ntBASIC15.53■□□□□ 0.08
VcanQ62059 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VcanQ62059 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.53■□□□□ 0.08
VcanQ62059 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VcanQ62059 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VcanQ62059 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
VcanQ62059 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VcanQ62059 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.53■□□□□ 0.08
VcanQ62059 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
VcanQ62059 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
VcanQ62059 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
VcanQ62059 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VcanQ62059 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.53■□□□□ 0.08
VcanQ62059 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VcanQ62059 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
VcanQ62059 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.53■□□□□ 0.08
VcanQ62059 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VcanQ62059 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.53■□□□□ 0.08
VcanQ62059 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
VcanQ62059 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.53■□□□□ 0.08
VcanQ62059 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.53■□□□□ 0.08
VcanQ62059 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
VcanQ62059 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VcanQ62059 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VcanQ62059 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
VcanQ62059 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VcanQ62059 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.52■□□□□ 0.08
VcanQ62059 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
VcanQ62059 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
VcanQ62059 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
VcanQ62059 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VcanQ62059 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
VcanQ62059 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
VcanQ62059 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.52■□□□□ 0.07
VcanQ62059 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VcanQ62059 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VcanQ62059 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
VcanQ62059 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VcanQ62059 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.52■□□□□ 0.07
VcanQ62059 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VcanQ62059 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
VcanQ62059 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
VcanQ62059 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
VcanQ62059 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.52■□□□□ 0.07
VcanQ62059 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.52■□□□□ 0.07
VcanQ62059 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
VcanQ62059 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
VcanQ62059 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VcanQ62059 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VcanQ62059 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
VcanQ62059 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.51■□□□□ 0.07
VcanQ62059 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.51■□□□□ 0.07
VcanQ62059 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VcanQ62059 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
VcanQ62059 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VcanQ62059 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.51■□□□□ 0.07
VcanQ62059 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.51■□□□□ 0.07
VcanQ62059 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.51■□□□□ 0.07
VcanQ62059 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
VcanQ62059 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VcanQ62059 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VcanQ62059 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.51■□□□□ 0.07
VcanQ62059 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VcanQ62059 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VcanQ62059 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
VcanQ62059 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.51■□□□□ 0.07
VcanQ62059 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
VcanQ62059 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VcanQ62059 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VcanQ62059 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VcanQ62059 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VcanQ62059 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VcanQ62059 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
VcanQ62059 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VcanQ62059 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.5■□□□□ 0.07
VcanQ62059 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VcanQ62059 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VcanQ62059 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VcanQ62059 Gm5866-201ENSMUST00000177881 973 ntBASIC15.5■□□□□ 0.07
VcanQ62059 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VcanQ62059 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VcanQ62059 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VcanQ62059 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
VcanQ62059 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
VcanQ62059 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VcanQ62059 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VcanQ62059 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.5■□□□□ 0.07
VcanQ62059 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VcanQ62059 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
VcanQ62059 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VcanQ62059 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VcanQ62059 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
VcanQ62059 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VcanQ62059 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
VcanQ62059 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms