Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ctr9Q62018 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.53■□□□□ 0.72
Ctr9Q62018 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ctr9Q62018 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ctr9Q62018 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ctr9Q62018 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ctr9Q62018 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ctr9Q62018 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.53■□□□□ 0.72
Ctr9Q62018 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ctr9Q62018 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ctr9Q62018 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ctr9Q62018 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ctr9Q62018 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ctr9Q62018 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ctr9Q62018 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.52■□□□□ 0.72
Ctr9Q62018 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.52■□□□□ 0.72
Ctr9Q62018 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ctr9Q62018 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ctr9Q62018 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ctr9Q62018 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.52■□□□□ 0.72
Ctr9Q62018 Gm27357-201ENSMUST00000183754 135 ntBASIC19.52■□□□□ 0.72
Ctr9Q62018 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.52■□□□□ 0.72
Ctr9Q62018 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.52■□□□□ 0.72
Ctr9Q62018 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ctr9Q62018 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.52■□□□□ 0.72
Ctr9Q62018 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ctr9Q62018 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ctr9Q62018 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.52■□□□□ 0.71
Ctr9Q62018 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ctr9Q62018 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ctr9Q62018 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.51■□□□□ 0.71
Ctr9Q62018 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Ctr9Q62018 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ctr9Q62018 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ctr9Q62018 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ctr9Q62018 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ctr9Q62018 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Ctr9Q62018 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.51■□□□□ 0.71
Ctr9Q62018 Gm28033-201ENSMUST00000184224 96 ntBASIC19.51■□□□□ 0.71
Ctr9Q62018 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ctr9Q62018 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Ctr9Q62018 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ctr9Q62018 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ctr9Q62018 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ctr9Q62018 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ctr9Q62018 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ctr9Q62018 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ctr9Q62018 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ctr9Q62018 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ctr9Q62018 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ctr9Q62018 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ctr9Q62018 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ctr9Q62018 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ctr9Q62018 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ctr9Q62018 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctr9Q62018 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Ctr9Q62018 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctr9Q62018 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.5■□□□□ 0.71
Ctr9Q62018 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ctr9Q62018 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ctr9Q62018 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.5■□□□□ 0.71
Ctr9Q62018 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ctr9Q62018 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctr9Q62018 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctr9Q62018 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctr9Q62018 Mir3081-201ENSMUST00000175305 84 ntBASIC19.5■□□□□ 0.71
Ctr9Q62018 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ctr9Q62018 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctr9Q62018 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.5■□□□□ 0.71
Ctr9Q62018 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctr9Q62018 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctr9Q62018 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctr9Q62018 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctr9Q62018 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctr9Q62018 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.5■□□□□ 0.71
Ctr9Q62018 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ctr9Q62018 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctr9Q62018 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctr9Q62018 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctr9Q62018 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctr9Q62018 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctr9Q62018 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctr9Q62018 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ctr9Q62018 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctr9Q62018 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctr9Q62018 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ctr9Q62018 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctr9Q62018 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctr9Q62018 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ctr9Q62018 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Ctr9Q62018 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctr9Q62018 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.49■□□□□ 0.71
Ctr9Q62018 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ctr9Q62018 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ctr9Q62018 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ctr9Q62018 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctr9Q62018 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctr9Q62018 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ctr9Q62018 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ctr9Q62018 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms