Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.2□□□□□ -0.46
Foxc1Q61572 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Foxc1Q61572 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxc1Q61572 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxc1Q61572 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxc1Q61572 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxc1Q61572 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.2□□□□□ -0.46
Foxc1Q61572 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.2□□□□□ -0.46
Foxc1Q61572 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxc1Q61572 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxc1Q61572 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxc1Q61572 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxc1Q61572 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Foxc1Q61572 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.2□□□□□ -0.46
Foxc1Q61572 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.2□□□□□ -0.46
Foxc1Q61572 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxc1Q61572 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxc1Q61572 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Foxc1Q61572 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Foxc1Q61572 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.19□□□□□ -0.46
Foxc1Q61572 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Foxc1Q61572 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Foxc1Q61572 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC12.19□□□□□ -0.46
Foxc1Q61572 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.19□□□□□ -0.46
Foxc1Q61572 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.19□□□□□ -0.46
Foxc1Q61572 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.19□□□□□ -0.46
Foxc1Q61572 Mir5130-201ENSMUST00000175160 84 ntBASIC12.19□□□□□ -0.46
Foxc1Q61572 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.19□□□□□ -0.46
Foxc1Q61572 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.19□□□□□ -0.46
Foxc1Q61572 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Foxc1Q61572 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.19□□□□□ -0.46
Foxc1Q61572 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxc1Q61572 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.19□□□□□ -0.46
Foxc1Q61572 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.18□□□□□ -0.46
Foxc1Q61572 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxc1Q61572 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Foxc1Q61572 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxc1Q61572 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Foxc1Q61572 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Foxc1Q61572 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxc1Q61572 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxc1Q61572 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Foxc1Q61572 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxc1Q61572 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.18□□□□□ -0.46
Foxc1Q61572 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.18□□□□□ -0.46
Foxc1Q61572 Gm6659-201ENSMUST00000174752 547 ntBASIC12.18□□□□□ -0.46
Foxc1Q61572 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.18□□□□□ -0.46
Foxc1Q61572 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.18□□□□□ -0.46
Foxc1Q61572 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Foxc1Q61572 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxc1Q61572 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.18□□□□□ -0.46
Foxc1Q61572 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxc1Q61572 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Foxc1Q61572 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.18□□□□□ -0.46
Foxc1Q61572 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Foxc1Q61572 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxc1Q61572 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxc1Q61572 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxc1Q61572 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxc1Q61572 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxc1Q61572 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxc1Q61572 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.17□□□□□ -0.46
Foxc1Q61572 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxc1Q61572 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Foxc1Q61572 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Foxc1Q61572 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Foxc1Q61572 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxc1Q61572 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxc1Q61572 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxc1Q61572 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Foxc1Q61572 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxc1Q61572 Gm16061-201ENSMUST00000122167 857 ntBASIC12.17□□□□□ -0.46
Foxc1Q61572 Gm13474-201ENSMUST00000122466 815 ntBASIC12.17□□□□□ -0.46
Foxc1Q61572 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Foxc1Q61572 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Foxc1Q61572 Gm18101-201ENSMUST00000215769 548 ntBASIC12.17□□□□□ -0.46
Foxc1Q61572 CT009764.1-201ENSMUST00000222260 483 ntBASIC12.17□□□□□ -0.46
Foxc1Q61572 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxc1Q61572 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxc1Q61572 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxc1Q61572 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms